Image Analysis

FIJI

An open-source image processing software. It is a distribution of ImageJ that package together Java and a lot of plugins organized into a coherent menu suitable for life sciences.

 

ImageJ Macro Development

As part of our support of research projects, we often develop ImageJ Macros to enable automated analysis of microscopy data. Here we make them available for use elsewhere.

Imaris

A complete 3D and 4D visualization package. Load, process and visualize images in any widely accepted image format to gain new insight from your microscopic data. Then present your results in 3D with the advanced movie generator and image export features.

Huygens Deconvolution

Huygens Deconvolution is a mathematical software for Image restoration. It is used to recover an image that is degraded by blurring and noise. The blurring is largely due to diffraction limited imaging by the microscope. The noise is usually photon noise, a term that refers to the inherent natural variation of the incident photon flux.

CellProfiler

A free open-source software designed to enable biologists without training in computer vision or programming to quantitatively measure phenotypes from thousands of images automatically.

Olympus CellSens Offline 

CellSens offline allows our users to open and visualize data from Olympus IX83 live cell, BX51 & FV3000 microscopes for processing.

MetaMorph

An image acquisition and processing package, with powerful tools and a visual journaling interface for automating processes and reducing "mouse-clicks".

Zeiss Zen lite and Zeiss Axiovision LE

The "light" versions of their confocal and widefield software to browse your database and view your ".lsm" and ".zvi" images and do some limited image processing.

Adobe Creative Suite

Photoshop and Illustrator are the industry standard tools to use for your images after acquisition to prepare them for publication and presentation.

AMP_horiz_black-txt_white-bg-removebg.pn
  • Twitter
  • YouTube